Hi, in looking through the documentation, it seems that the recommend location for the certbot configuration file is /etc/letsencrypt/cli.ini. It also seems as though when renewing, one must remove the domains section of the configuration file since the renew command impacts all of the installed domains. The cli.ini seems to be a single global configuration file, maybe the logic is that it shouldn’t be representing any single domain?
However, how would you set up auto-renew for a server that has multiple different domains at different webroots? If the renew command affects all domains on the server, but the cli.ini only allows a single webroot-path, how would you tell domain A.com to renew using one webroot and B.com to use a different webroot?