Hello @fallingrock,
You may have already seen these resources, but an earlier discussion from Multiple domain renewal config file may help get you started.
@jared.m is spot on… the documentation on Certbot Command Line Options is extremely useful.
“certbot renew” is going to want to do them all by default… But if I’m not mistaken, the “-d (domain) options” might suit your needs. If it were me, I’d consider working out two separate requests… One for the wildcard certificate and a second for your individual cert(s) respectively. If it works out you could then script it and create a crontab to automate the process for the future. Keep in mind that your cli.ini (wherever your platform stores it can override your input so make sure cli.ini contains only global options compatible with both your “certificate profiles”.