Renewal process problem

There is no port 443 definition. What's the content of the 443 vHost?

There ( https://check-your-website.server-daten.de/?q=rinex.org.rw ):

Domainname Http-Status redirect Sec. G
http://rinex.org.rw/
196.49.7.181 200 1.104 H
http://www.rinex.org.rw/
196.49.7.181 200 1.104 H
https://rinex.org.rw/
196.49.7.181 200 2.500 I
https://www.rinex.org.rw/
196.49.7.181 200 2.476 I

is a running https. Use the "show header" box.

A standard Apache sends a Header

Server: Apache ...

Your Server doesn't send such a header. So it doesn't look like an Apache, instead something other.

Please: The complete output of

apachectl configtest
apachectl fullstatus
apachectl -S