Now…the reason I have 2 servers is because the service on one is rented out and I do want it separatly.
The issue is that I cannot get them both to work at the same time. If I register nr2.mydomain.com then mydomain.com stops working and the other way around. How can I with 2 servers have a certificate on one for the domain and the other a certificate for a subdomain?
Can you post the specific error message? That Let’s Encrypt “[does] not support subdomains” is neither helpful nor an accurate statement. We really need to see the actual message.
I mean that I can manage to register n22.mydomain.com and get the certificate working, but then mydomain.com stops working - even if I have not touched mydomain.com. So - clearly it has to do with the registretion of the certificate.