Hint: The Certificate Authority failed to verify the temporary Apache configuration changes made by Certbot. Ensure that the listed domains point to this Apache server and that it is accessible from the internet.
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My web server is (include version): Apache2
The operating system my web server runs on is (include version): Ubuntu 22.04
There's a discrepancy between the IPv4 address and the IPv6 address configured for your domain/hostnames. Using IPv4, an Apache webserver is sending a reply, but using IPv6 the webserver identifies itself as a LiteSpeed server.
I don't know who manages the IP addresses of the server or the DNS of your domain. You say you have root access: don't you have management over the IP addresses of the server?
I still see the same IP addresses, maybe it needs to propogate yet. That said, I'm directly asking the niagahosting nameservers, so I'm a little bit doubtful.
Can you please share the IP addresses assigned to your VPS (screenshot of your hosting providers management panel?) and the settings of your DNS zone?
I recommend using IPv6 in general, as there are users with IPv6-only internet connections. I couldn't find any statistics on how many exactly just now, but I know they're out there.