Pre-install query about several sites on single server

I maintain a server running Debian Jessie that hosts sites for multiple domains. I want to install a certificate for just one of those domains. Its unclear to me from the documentation if there are any special considerations for installing where there are multiple virtual hosts and just one of the hosts requires a certificate. Is there anything I ought to be aware of?

When all the multiple virtual hosts are in separate Apache (assuming you’re using Apache) configuration files, certbot can handle it perfectly: when not specifying anything, you can select one or more hostnames for which you’d like a certificate. Or you can specify it directly on the command line.

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