Which config file got deleted?
Just /etc/letsencrypt/options-ssl-nginx.conf ?
If so, use this to create it again:
# This file contains important security parameters. If you modify this file
# manually, Certbot will be unable to automatically provide future security
# updates. Instead, Certbot will print and log an error message with a path to
# the up-to-date file that you will need to refer to when manually updating
# this file.
ssl_session_cache shared:le_nginx_SSL:10m;
ssl_session_timeout 1440m;
ssl_session_tickets off;
ssl_protocols TLSv1.2 TLSv1.3;
ssl_prefer_server_ciphers off;
ssl_ciphers "ECDHE-ECDSA-AES128-GCM-SHA256:ECDHE-RSA-AES128-GCM-SHA256:ECDHE-ECDSA-AES256-GCM-SHA384:ECDHE-RSA-AES256-GCM-SHA384:ECDHE-ECDSA-CHACHA20-POLY1305:ECDHE-RSA-CHACHA20-POLY1305:DHE-RSA-AES128-GCM-SHA256:DHE-RSA-AES256-GCM-SHA384";